Changeset 4217 for exist/trunk
 Timestamp:
 22/09/08 17:31:19 (11 years ago)
 Location:
 exist/trunk/python/ndgUtils
 Files:

 3 edited
Legend:
 Unmodified
 Added
 Removed

exist/trunk/python/ndgUtils/models/Atom.py
r4214 r4217 127 127 if atomType: 128 128 logging.info("  of type '%s'" %atomType) 129 self.atomType = atomType129 self.atomTypeID = atomType 130 130 131 131 # some data have further subtypes specified … … 168 168 else: 169 169 self.VTD = VTD() 170 170 171 if self.atomTypeID: 172 self.atomTypeName = self.VTD.TERM_DATA[self.atomTypeID].title 173 171 174 self.ME = ME.MolesEntity() 172 175 … … 187 190 188 191 192 def getValidSubTypes(self): 193 ''' 194 Get list of subtypes that are valid wrt this atom type 195 ''' 196 logging.debug("Lookup up subtypes for type, '%s'" %self.atomTypeID) 197 subTypes = self.VTD.SUBTYPE_TERMS.get(self.atomTypeID) or [] 198 logging.debug(subTypes) 199 return subTypes 200 201 202 189 203 def __addAtomTypeDataXML(self, root): 190 204 ''' … … 192 206  and lookup and add the appropriate vocab term data 193 207 ''' 194 if self.atomType :208 if self.atomTypeID: 195 209 logging.info("Adding atom type info to XML output") 196 210 category = Category() 197 category.label = self. VTD.TERM_DATA[self.atomType].title211 category.label = self.atomTypeID 198 212 # look up the appropriate vocab term data 199 category.scheme = self.VTD.getTermCurrentVocabURL(self.atomType )213 category.scheme = self.VTD.getTermCurrentVocabURL(self.atomTypeID) 200 214 category.term = self.ATOM_TYPE 201 215 root.append(category.toXML()) … … 204 218 logging.info("Adding atom subtype info to XML output") 205 219 # NB subtypes not all defined, so leave this out for the moment 206 category.label = self.subtype #self.VTD.TERM_DATA[self.subtype].title220 category.label = self.subtype 207 221 # look up the appropriate vocab term data 208 category.scheme = 'NOT SET UP AT PRESENT'#self.VTD.getTermCurrentVocabURL(self.subtype)222 category.scheme = self.VTD.getTermCurrentVocabURL(self.subtype) 209 223 category.term = self.ATOM_SUBTYPE 210 224 root.append(category.toXML()) … … 511 525 if cat.term == self.ATOM_TYPE: 512 526 logging.debug("Found atom type data") 513 self.atomType = cat.label 527 self.atomTypeID = cat.label 528 self.atomTypeName = self.VTD.TERM_DATA[cat.label].title 514 529 continue 515 530 elif cat.term == self.ATOM_SUBTYPE: 
exist/trunk/python/ndgUtils/models/MolesEntity.py
r4214 r4217 176 176 deploymentLink = DeploymentLink(contentURL, vocabURL, title=title) 177 177 178 logging.info(VTD.TERM_DATA[VTD.ACTIVITY_TERM].vocabURL)179 178 self._addDeploymentDetails(deploymentLink) 180 179 
exist/trunk/python/ndgUtils/vocabtermdata.py
r4209 r4217 42 42 DE_TERM = "DE" 43 43 44 LIDAR_TERM = "dgLidar" 45 RADAR_TERM = "dgRadar" 46 SONDE_TERM = "dgSonde" 47 NAVIGATION_TERM = "dgNavigation" 48 GAS_CHROMATOGRAPH_TERM = "dgGasChromatograph" 49 SPECTROMETER_TERM = "dgSpectrometer" 50 MASS_SPECTROMETER_TERM = "dgMassSpectrometer" 51 52 SIMULATION_TERM = "dgSimulation" 53 ANALYSIS_TERM = "dgAnalysis" 54 MEASUREMENT_TERM = "dgMeasurement" 55 56 DATA_COLLECTION_TERM = "dgDataCollection" 57 DATA_PROJECT_TERM = "dgDataProject" 58 DATA_CAMPAIGN_TERM = "dgDataCampaignProject" 59 DATA_INVESTIGATION_TERM = "dgDataInvestigation" 60 FLIGHT_TERM = "dgFlight" 61 CRUISE_TERM = "dgCruise" 62 FUNDING_PROGRAM_TERM = "dgFundingProgram" 63 64 STATIONARY_PLATFORM_TERM = "dgStationaryPlatform" 65 MOVING_PLATFORM_TERM = "dgMovingPlatform" 66 LAND_STATION_TERM = "dgLandStation" 67 MOORING_TERM = "dgMooring" 68 STATION_GROUP_TERM = "dgStationGroup" 69 SHIP_TERM = "dgShip" 70 AIRCRAFT_TERM = "dgAircraft" 71 SATELLITE_TERM = "dgSatellite" 72 COMPUTER_TERM = "dgComputer" 73 44 74 TERM_DATA = { 45 75 URI_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/N041', '3', title = 'Data Home Page'), … … 59 89 OBS_TERM:VocabTermItem('OBS  NOT YET SET UP', 'OBS', title = 'Observation Station'), 60 90 GRANULE_TERM:VocabTermItem('GRAN  NOT YET SET UP', 'GRAN', title = 'Data Granule'), 61 DE_TERM:VocabTermItem('DE  NOT YET SET UP', 'DE', title = 'Data Entity') 91 DE_TERM:VocabTermItem('DE  NOT YET SET UP', 'DE', title = 'Data Entity'), 92 LIDAR_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG02', title = LIDAR_TERM), 93 RADAR_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG03', title = RADAR_TERM), 94 SONDE_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG04', title = SONDE_TERM), 95 NAVIGATION_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG05', title = NAVIGATION_TERM), 96 GAS_CHROMATOGRAPH_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG06', title = GAS_CHROMATOGRAPH_TERM), 97 SPECTROMETER_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG07', title = SPECTROMETER_TERM), 98 MASS_SPECTROMETER_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG08', title = MASS_SPECTROMETER_TERM), 99 SIMULATION_TERM:VocabTermItem('NOT YET SET UP', SIMULATION_TERM, title = SIMULATION_TERM), 100 ANALYSIS_TERM:VocabTermItem('NOT YET SET UP', ANALYSIS_TERM, title = ANALYSIS_TERM), 101 MEASUREMENT_TERM:VocabTermItem('NOT YET SET UP', MEASUREMENT_TERM, title = MEASUREMENT_TERM), 102 DATA_COLLECTION_TERM:VocabTermItem('NOT YET SET UP', DATA_COLLECTION_TERM, title = DATA_COLLECTION_TERM), 103 DATA_PROJECT_TERM:VocabTermItem('NOT YET SET UP', DATA_PROJECT_TERM, title = DATA_PROJECT_TERM), 104 DATA_CAMPAIGN_TERM:VocabTermItem('NOT YET SET UP', DATA_CAMPAIGN_TERM, title = DATA_CAMPAIGN_TERM), 105 DATA_INVESTIGATION_TERM:VocabTermItem('NOT YET SET UP', DATA_INVESTIGATION_TERM, title = DATA_INVESTIGATION_TERM), 106 FLIGHT_TERM:VocabTermItem('NOT YET SET UP', FLIGHT_TERM, title = FLIGHT_TERM), 107 CRUISE_TERM:VocabTermItem('NOT YET SET UP', CRUISE_TERM, title = CRUISE_TERM), 108 FUNDING_PROGRAM_TERM:VocabTermItem('NOT YET SET UP', FUNDING_PROGRAM_TERM, title = FUNDING_PROGRAM_TERM), 109 110 STATIONARY_PLATFORM_TERM:VocabTermItem('NOT YET SET UP', STATIONARY_PLATFORM_TERM, title = STATIONARY_PLATFORM_TERM), 111 MOVING_PLATFORM_TERM:VocabTermItem('NOT YET SET UP', MOVING_PLATFORM_TERM, title = MOVING_PLATFORM_TERM), 112 LAND_STATION_TERM:VocabTermItem('NOT YET SET UP', LAND_STATION_TERM, title = LAND_STATION_TERM), 113 MOORING_TERM:VocabTermItem('NOT YET SET UP', MOORING_TERM, title = MOORING_TERM), 114 STATION_GROUP_TERM:VocabTermItem('NOT YET SET UP', STATION_GROUP_TERM, title = STATION_GROUP_TERM), 115 SHIP_TERM:VocabTermItem('NOT YET SET UP', SHIP_TERM, title = SHIP_TERM), 116 AIRCRAFT_TERM:VocabTermItem('NOT YET SET UP', AIRCRAFT_TERM, title = AIRCRAFT_TERM), 117 SATELLITE_TERM:VocabTermItem('NOT YET SET UP', SATELLITE_TERM, title = SATELLITE_TERM), 118 COMPUTER_TERM:VocabTermItem('NOT YET SET UP', COMPUTER_TERM, title = COMPUTER_TERM), 119 120 #_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG09', title = _TERM), 121 #_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG10', title = _TERM), 122 #_TERM:VocabTermItem('http://vocab.ndg.nerc.ac.uk/term/C330', 'NG1', title = _TERM), 62 123 } 124 125 126 #'dgMetSensor':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG09', 127 #'dgDOAS':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG10', 128 #'dgASOZ':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG11', 129 #'dgRadiometer':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG12', 130 #'dgFAGE':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG13', 131 #'dgImager':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG14', 132 #'dgFilter':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG15', 133 #'dgParticleCounter':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG16', 134 #'dgSampler':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG17', 135 #'dgOtherInstrumentType':'http://vocab.ndg.nerc.ac.uk/term/C330/0/NG99', 136 #'dgModel':'dgModel  NOT YET SET UP', 137 #'dgInstrument':'dgInstrument  NOT YET SET UP' 138 139 140 141 # A dictionary to group the various valid subtypes of atoms  grouped by their 142 # main type 143 SUBTYPE_TERMS = { 144 DPT_TERM: [ 145 TERM_DATA[LIDAR_TERM], TERM_DATA[RADAR_TERM], \ 146 TERM_DATA[SONDE_TERM], TERM_DATA[NAVIGATION_TERM], \ 147 TERM_DATA[GAS_CHROMATOGRAPH_TERM], TERM_DATA[SPECTROMETER_TERM], \ 148 TERM_DATA[MASS_SPECTROMETER_TERM] 149 ], 150 151 DE_TERM: [ 152 TERM_DATA[SIMULATION_TERM], TERM_DATA[ANALYSIS_TERM], \ 153 TERM_DATA[MEASUREMENT_TERM] 154 ], 155 ACTIVITY_TERM: [ 156 TERM_DATA[DATA_COLLECTION_TERM], TERM_DATA[DATA_PROJECT_TERM], \ 157 TERM_DATA[DATA_CAMPAIGN_TERM], TERM_DATA[DATA_INVESTIGATION_TERM], \ 158 TERM_DATA[FLIGHT_TERM], TERM_DATA[CRUISE_TERM], \ 159 TERM_DATA[FUNDING_PROGRAM_TERM], 160 ], 161 OBS_TERM: [ 162 TERM_DATA[STATIONARY_PLATFORM_TERM], TERM_DATA[MOVING_PLATFORM_TERM], \ 163 TERM_DATA[LAND_STATION_TERM], TERM_DATA[MOORING_TERM], \ 164 TERM_DATA[STATION_GROUP_TERM], TERM_DATA[SHIP_TERM], \ 165 TERM_DATA[AIRCRAFT_TERM], TERM_DATA[SATELLITE_TERM], \ 166 TERM_DATA[COMPUTER_TERM] 167 ] 168 } 169 170 171 172 63 173 64 174 ONE_HOUR = 3600.0 … … 75 185 logging.info("VocabTermData object set up") 76 186 187 188 def getTermFromTitle(self, title): 189 ''' 190 Given a term title/label, get back the related term id 191 @param title: title/label of term id to retrieve 192 @raise ValueError: if more than one title or no title is returned 193 ''' 194 termID = [] 195 for val in self.TERM_DATA.itervalues(): 196 if val.title == title: 197 termID.append(val.termID) 198 199 if len(termID) != 1: 200 errorMessage = "Error: could not accurately determine the vocab term \ 201 ID for the label, '%s'  %s values returned" %(title, len(termID)) 202 logging.error(errorMessage) 203 raise ValueError(errorMessage) 204 205 return termID[0] 206 77 207 78 208 def _getVocabDataPage(self):
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